Next Generation Sequencing Sample Preparation Market

By Product and Service;

Instruments, Consumables, and Services

By Workflow;

NGS Library Preparation Kits, Semi-Automated Library Preparation, Automated Library Preparation, and Clonal Amplification

By Application;

Oncology, Clinical Investigation, Reproductive Health, HLA Typing/Immune System Monitoring, Metagenomics, Epidemiology & Drug Development, Agrigenomics & Forensics, and Consumer Genomics

By End-Use;

Academic Research, Clinical Research, Hospitals & Clinics, Pharma & Biotech Entities, and Others

By Geography;

North America, Europe, Asia Pacific, Middle East & Africa, and Latin America - Report Timeline (2021 - 2031)
Report ID: Rn121091041 Published Date: August, 2025 Updated Date: September, 2025

Next Generation Sequencing Sample Preparation Market Overview

Next Generation Sequencing Sample Preparation Market (USD Million)

Next Generation Sequencing Sample Preparation Market was valued at USD 4,215.96 million in the year 2024. The size of this market is expected to increase to USD 10,042.02 million by the year 2031, while growing at a Compounded Annual Growth Rate (CAGR) of 13.2%.


Next Generation Sequencing Sample Preparation Market

*Market size in USD million

CAGR 13.2 %


Study Period2025 - 2031
Base Year2024
CAGR (%)13.2 %
Market Size (2024)USD 4,215.96 Million
Market Size (2031)USD 10,042.02 Million
Market ConcentrationLow
Report Pages355
4,215.96
2024
10,042.02
2031

Major Players

  • Illumina, Inc
  • F. Hoffmann-La Roche Ltd
  • Agilent Technologies, Inc
  • PierianDx
  • Eurofins Scientific
  • Oxford Nanopore Technologies
  • Quest Diagnostics Incorporated
  • Foundation Medicine, Inc
  • Macrogen, Inc
  • Thermo Fisher Scientific, Inc
  • QIAGEN
  • BGI
  • Perkin Elmer, Inc
  • Pacific Biosciences of California, Inc
  • Bio-Rad Laboratories, Inc
  • Myriad Genetics, Inc
  • LGC Limited
  • Vela Diagnostics

Market Concentration

Consolidated - Market dominated by 1 - 5 major players

Next Generation Sequencing Sample Preparation Market

Fragmented - Highly competitive market without dominant players


The Next Generation Sequencing Sample Preparation Market is growing strongly as labs adopt automated prep solutions to improve throughput and quality control. Around 65% of sequencing deployments now include systems that standardize library prep, reduce manual steps, and improve overall efficiency. This shift reflects the move toward automation-enabled workflows for improved reproducibility and faster turnaround.

Strategic Alliances Expanding Access to Prep Technologies
Nearly 60% of genomic labs now use next‑gen sample prep tools thanks to partnerships and mergers between kit providers and sequencing instrument manufacturers. These strategic alliances streamline product bundling, training, and purchasing. The result is broader market reach, standardized workflows across platforms, and simplified integration for both research and clinical labs.

Smart Innovations Enhancing Throughput and Quality
Major technological advancements—such as droplet‑based fragmentation, bead cleanup automation, and enzymatic library construction—have improved operational efficiency by more than 64%. The automation reduces variability, improves data quality, and lowers reagent costs. Integration of real‑time QC and indexing tracking supports error reduction and ensures consistent sequencing‑ready libraries.

Promising Growth Backed by Automation and Standardization
With about 68% of labs expressing support for integrated prep systems, the market’s future expansion appears robust. Ongoing investment in modular prep devices, cloud QC analytics, and reagent ecosystem alignment is shaping a positive growth trajectory. Continued innovation and partnerships are making sequencing sample prep faster, more accurate, and more widely adopted across genomics applications.

  1. Introduction
    1. Research Objectives and Assumptions
    2. Research Methodology
    3. Abbreviations
  2. Market Definition & Study Scope
  3. Executive Summary
    1. Market Snapshot, By Product & Service
    2. Market Snapshot, By Workflow
    3. Market Snapshot, By Application
    4. Market Snapshot, By End-Use
    5. Market Snapshot, By Region
  4. Next Generation Sequencing Sample Preparation Market Dynamics
    1. Drivers, Restraints and Opportunities
      1. Drivers
        1. Increasing adoption of NGS across various fields
        2. Falling costs of NGS procedures
        3. Advancements in NGS technology
      2. Restraints
        1. Ethical and privacy concerns
        2. Shift towards personalized medicine
      3. Opportunities
        1. Technological advancements
        2. Focus on automation
    2. PEST Analysis
      1. Political Analysis
      2. Economic Analysis
      3. Social Analysis
      4. Technological Analysis
    3. Porter's Analysis
      1. Bargaining Power of Suppliers
      2. Bargaining Power of Buyers
      3. Threat of Substitutes
      4. Threat of New Entrants
      5. Competitive Rivalry

  5. Market Segmentation
    1. Next Generation Sequencing Sample Preparation Market, By Product & Service, 2021 - 2031 (USD Million)
      1. Instruments
      2. Consumables
      3. Services
    2. Next Generation Sequencing Sample Preparation Market, By Workflow, 2021 - 2031 (USD Million)
      1. NGS Library Preparation Kits
      2. Semi-automated Library Preparation
      3. Automated Library Preparation
      4. Clonal Amplification
    3. Next Generation Sequencing Sample Preparation Market, By Application, 2021 - 2031 (USD Million)
      1. Oncology
      2. Clinical Investigation
      3. Reproductive Health
      4. HLA Typing/Immune System Monitoring
      5. Metagenomics, Epidemiology & Drug Development
      6. Agrigenomics & Forensics
      7. Consumer Genomics
    4. Next Generation Sequencing Sample Preparation Market, By End-Use, 2021 - 2031 (USD Million)
      1. Academic Research
      2. Clinical Research
      3. Hospitals & Clinics
      4. Pharma & Biotech Entities
      5. Other Users
    5. Next Generation Sequencing Sample Preparation Market, By Geography, 2021 - 2031 (USD Million)
      1. North America
        1. United States
        2. Canada
      2. Europe
        1. Germany
        2. United Kingdom
        3. France
        4. Italy
        5. Spain
        6. Nordic
        7. Benelux
        8. Rest of Europe
      3. Asia Pacific
        1. Japan
        2. China
        3. India
        4. Australia & New Zealand
        5. South Korea
        6. ASEAN (Association of South East Asian Countries)
        7. Rest of Asia Pacific
      4. Middle East & Africa
        1. GCC
        2. Israel
        3. South Africa
        4. Rest of Middle East & Africa
      5. Latin America
        1. Brazil
        2. Mexico
        3. Argentina
        4. Rest of Latin America
  6. Competitive Landscape
    1. Company Profiles
      1. Illumina, Inc
      2. F. Hoffmann-La Roche Ltd
      3. Agilent Technologies, Inc
      4. PierianDx
      5. Eurofins Scientific
      6. Oxford Nanopore Technologies
      7. Quest Diagnostics Incorporated
      8. Foundation Medicine, Inc
      9. Macrogen, Inc
      10. Thermo Fisher Scientific, Inc
      11. QIAGEN
      12. BGI
      13. Perkin Elmer, Inc
      14. Pacific Biosciences of California, Inc
      15. Bio-Rad Laboratories, Inc
      16. Myriad Genetics, Inc
      17. LGC Limited
      18. Vela Diagnostics
  7. Analyst Views
  8. Future Outlook of the Market